Gene: Lj1g0006616

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj1g0006616
  • Transcript Identifier Lj1g0006616.1
  • Gene Type Coding gene
  • Location chr1 : 33875330-33877504 : positive

Gene Family Information

  • ID HOM05D003327
  • #Genes/#Species 205/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj1g0006616.Lj1.0v1
  • pacid 44918122

Descriptions

  • Description PTHR11246//PTHR11246:SF1 - PRE-MRNA SPLICING FACTOR // PRE-MRNA-PROCESSING FACTOR 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR027108 Pre-mRNA-processing factor 6/Prp1/STA1
IPR045075 Pre-mRNA-splicing factor Syf1-like
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
16.2.1.4.5 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (PRPF6/PRP1/STA1)