Gene: HPP92_020346

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_020346
  • Transcript Identifier Vpl10Ag20346.1
  • Gene Type Coding gene
  • Location CM028159.1 : 21410722-21416718 : positive

Gene Family Information

  • ID HOM05D001363
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl10Ag20346.1
  • pid KAG0464277.1

Descriptions

  • Description Meiotic recombination protein DMC1 homolog ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G22880
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT3G22880
GO:0007130
ISO
PLAZA Integrative Orthologysynaptonemal complex assembly Os12g0143800
GO:0006259
ISO
PLAZA Integrative OrthologyDNA metabolic process AT3G22880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0003677
IEA
InterProDNA binding
GO:0000150
IEA
InterProDNA strand exchange activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G22880
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding Os12g0143800
GO:0017116
ISO
PLAZA Integrative Orthologysingle-stranded DNA helicase activity Os12g0143800
GO:0003697
ISO
PLAZA Integrative Orthologysingle-stranded DNA binding Os12g0143800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013632 DNA recombination and repair protein Rad51-like, C-terminal
IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR033925 Rad51/DMC1/RadA
IPR011940 Meiotic recombination protein Dmc1
Mapman id Description
13.3.5.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)