Gene: FAN12G3845

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN12G3845
  • Transcript Identifier FAN12G3845.1
  • Gene Type Coding gene
  • Location Fvb4-3 : 18341647-18346263 : positive

Gene Family Information

  • ID HOM05D001154
  • #Genes/#Species 535/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id augustus_masked-Fvb4-3-processed-gene-183.1.v1.0.a1
  • pacid 50473141

Descriptions

  • Description K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT4G15560
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT4G15560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008661
IEA
InterPro1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0003824
IEA
InterProcatalytic activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT4G15560
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G15560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G15560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005477 Deoxyxylulose-5-phosphate synthase
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR033248 Transketolase, C-terminal domain
IPR029061 Thiamin diphosphate-binding fold
Mapman id Description
9.1.2.2 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-D-xylulose 5-phosphate synthase (DXS)