Gene: Zm00001eb253560

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb253560
  • Transcript Identifier Zm00001eb253560_T001
  • Gene Type Coding gene
  • Location 5 : 212858295-212863962 : positive

Gene Family Information

  • ID HOM05D001197
  • #Genes/#Species 523/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb253560_T001
  • pid Zm00001eb253560_P001
  • uniprot A0A1D6HJ92
  • uniprot A0A1D6HJ82
  • uniprot A0A1D6HJ93
  • uniprot C0HFE5
  • uniprot A0A1D6HJ83
  • uniprot A0A1D6HJ84
  • uniprot A0A4X8UQV7
  • uniprot A0A3L6EKG6
  • uniprot A0A1D6HJ88
  • entrez 100304402
  • refseq NM_001165838.1
  • refseq XP_008643905.1
  • refseq XM_008645683.1
  • refseq NP_001159310.1
  • V4_identifier Zm00001d017930

Descriptions

  • Description Zm00001e015726
  • Description organelle RRM protein1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G20930
GO:0016554
IMP
IEA
GOA Databasecytidine to uridine editing
GO:0016554
IEA
InterProcytidine to uridine editing
GO:0080156
IBA
GOA Databasemitochondrial mRNA modification
GO:1900871
IMP
GOA Databasechloroplast mRNA modification
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G20930
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20930
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IBA
GOA Databasemitochondrion
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G20030
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily
IPR039206 MORF/ORRM1/DAG-like
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.11.3.3.2 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (ORRM)