Gene: DCAR_014734
General Information
Structural Information
- Species Daucus carota
- Gene Identifier DCAR_014734
- Transcript Identifier DCAR_014734
- Gene Type Coding gene
- Location DCARv2_Chr4 : 19295437-19309533 : positive
Gene Family Information
- ID HOM05D001201
- #Genes/#Species 520/96
- Phylogenetic origin
- ID ORTHO05D001100
- #Genes/#Species 487/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 36081497
- id DCAR_014734.v1.0
- uniprot A0A161WN98
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010216 | ISO | PLAZA Integrative Orthology | maintenance of DNA methylation | AT4G34060 |
GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT4G34060 |
GO:0006284 | IEA | GOA Database | base-excision repair | |
GO:0006284 | IEA | InterPro | base-excision repair | |
GO:0006281 | IEA | GOA Database | DNA repair | |
GO:0006281 | IEA | InterPro | DNA repair | |
GO:0080111 | IEA | GOA Database | DNA demethylation | |
GO:0080111 | IEA | InterPro | DNA demethylation |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0051747 | ISO | PLAZA Integrative Orthology | cytosine C-5 DNA demethylase activity | AT4G34060 |
GO:0035514 | IEA | GOA Database | DNA demethylase activity | |
GO:0035514 | IEA | InterPro | DNA demethylase activity | |
GO:0019104 | IEA | GOA Database | DNA N-glycosylase activity | |
GO:0019104 | IEA | InterPro | DNA N-glycosylase activity | |
GO:0003824 | IEA | GOA Database | catalytic activity | |
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0051539 | IEA | GOA Database | 4 iron, 4 sulfur cluster binding | |
GO:0051539 | IEA | InterPro | 4 iron, 4 sulfur cluster binding | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal |
IPR037176 | Osmotin/thaumatin-like superfamily |
IPR001938 | Thaumatin family |
IPR044811 | DNA glycosylase, plant |
IPR011257 | DNA glycosylase |
IPR003651 | Endonuclease III-like, iron-sulphur cluster loop motif |
IPR028925 | Demeter, RRM-fold domain |
IPR003265 | HhH-GPD domain |
Mapman id | Description |
---|---|
12.5.3.1 | Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.methylcytosine-specific DNA glycosylase (ROS1) |