Gene: ClCG10G021680
General Information
Structural Information
- Species Citrullus lanatus
- Gene Identifier ClCG10G021680
- Transcript Identifier ClCG10G021680.1
- Gene Type Coding gene
- Location CG_Chr10 : 36298865-36300385 : negative
Gene Family Information
- ID HOM05D000282
- #Genes/#Species 1541/100
- Phylogenetic origin
- ID ORTHO05D000272
- #Genes/#Species 1231/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid ClCG10G021680.1
- name maker-CGscf_0061-augustus-gene-0.879
- name maker-CGscf_0061-augustus-gene-0.879-mRNA-1
Descriptions
- Description tubulin beta chain 3 LENGTH=450
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G12250 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G29550 |
| GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G12250 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G20890 |
| GO:0005200 | IEA | InterPro | structural constituent of cytoskeleton | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G12250 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G29550 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G29550 |
| GO:0045298 | ISO | PLAZA Integrative Orthology | tubulin complex | AT5G62700 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G29550 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G20890 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G29550 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT4G20890 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT2G29550 |
| GO:0005874 | IEA | InterPro | microtubule |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| IPR023123 | Tubulin, C-terminal |
| IPR002453 | Beta tubulin |
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR000217 | Tubulin |
| Mapman id | Description |
|---|---|
| 20.1.1.2 | Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin |