Gene: ClCG09G022170

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG09G022170
  • Transcript Identifier ClCG09G022170.1
  • Gene Type Coding gene
  • Location CG_Chr09 : 39198841-39209232 : negative

Gene Family Information

  • ID HOM05D000629
  • #Genes/#Species 905/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG09G022170.1
  • name augustus_masked-CGscf_0033-processed-gene-0.402
  • name augustus_masked-CGscf_0033-processed-gene-0.402-mRNA-1

Descriptions

  • Description Paired amphipathic helix protein Sin3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G01320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IEA
InterProtranscription corepressor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G24230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G01320
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G15020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036600 Paired amphipathic helix superfamily
IPR039774 Transcriptional regulatory protein Sin3-like
IPR003822 Paired amphipathic helix
IPR013194 Histone deacetylase interacting domain
IPR031693 Sin3, C-terminal
Mapman id Description
12.3.2.1.1.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.key scaffold component SNL