Gene: Cc07_g05560
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc07_g05560
- Transcript Identifier Cc07_g05560.1
- Gene Type Coding gene
- Location chr7 : 3919576-3923877 : positive
Gene Family Information
- ID HOM05D005480
- #Genes/#Species 140/95
- Phylogenetic origin
- ID ORTHO05D006735
- #Genes/#Species 139/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB D7MB16
- UniProtKB G7K9F1
- UniProtKB D0VEB0
- id GSCOCG00039832001
Descriptions
- Description hydroxyproline-rich glycoprotein family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006913 | IEA | InterPro | nucleocytoplasmic transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008139 | IEA | InterPro | nuclear localization sequence binding | |
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G37130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT4G37130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR024882 | Nucleoporin p58/p45 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.6.3 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP58) |