Gene: AT4G37130
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G37130
- Transcript Identifier AT4G37130.1
- Gene Type Coding gene
- Location Chr4 : 17489567-17491773 : positive
Gene Family Information
- ID HOM05D005480
- #Genes/#Species 140/95
- Phylogenetic origin
- ID ORTHO05D006735
- #Genes/#Species 139/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G37130.1
- Alias TCU1,TRANSCURVATA 1
- uniprot Q8RWH9
Descriptions
- Description hydroxyproline-rich glycoprotein family protein
- Computational description hydroxyproline-rich glycoprotein family protein; Has 29299 Blast hits to 11722 proteins in 694 species: Archae - 13; Bacteria - 1010; Metazoa - 7996; Fungi - 3634; Plants - 2592; Viruses - 347; Other Eukaryotes - 13707 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051028 | IEA | GOA Database | mRNA transport | |
| GO:0006913 | IEA | Gene Ontology | nucleocytoplasmic transport | |
| GO:0006913 | IEA | InterPro | nucleocytoplasmic transport | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | GOA Database | structural constituent of nuclear pore | |
| GO:0017056 | IBA | Gene Ontology | structural constituent of nuclear pore | 1 |
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0008139 | IEA | GOA Database | nuclear localization sequence binding | |
| GO:0008139 | IBA | Gene Ontology | nuclear localization sequence binding | 1 |
| GO:0008139 | IEA | InterPro | nuclear localization sequence binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | GOA Database | nuclear pore | |
| GO:0005643 | IBA | Gene Ontology | nuclear pore | 1 |
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005635 | IEA | GOA Database | nuclear envelope | |
| GO:0005635 | IDA | Gene Ontology | nuclear envelope | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR024882 | Nucleoporin p58/p45 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.6.3 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP58) |