Gene: Cc06_g12540
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc06_g12540
- Transcript Identifier Cc06_g12540.1
- Gene Type Coding gene
- Location chr6 : 10170397-10177838 : negative
Gene Family Information
- ID HOM05D000112
- #Genes/#Species 3032/97
- Phylogenetic origin
- ID ORTHO05D001918
- #Genes/#Species 337/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB G7JS69
- UniProtKB P93022
- UniProtKB Q8RYC8
- UniProtKB A3B9A0
- UniProtKB H9B4E4
- UniProtKB Q3Y6G5
- id GSCOCG00041525001
Descriptions
- Description Auxin response factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0040008 | ISO | PLAZA Integrative Orthology | regulation of growth | AT5G20730 |
| GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | AT1G19220 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT1G19220 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G20730 |
| GO:0009638 | ISO | PLAZA Integrative Orthology | phototropism | AT5G20730 |
| GO:0048527 | ISO | PLAZA Integrative Orthology | lateral root development | AT1G19220 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT1G19220 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT1G19220 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT5G20730 |
| GO:0009785 | ISO | PLAZA Integrative Orthology | blue light signaling pathway | AT5G20730 |
| GO:0009851 | ISO | PLAZA Integrative Orthology | auxin biosynthetic process | Solyc07g042260.4 |
| GO:0009725 | IEA | InterPro | response to hormone | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G19220 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT1G19220 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G19220 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |