Gene: AT1G19220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G19220
- Transcript Identifier AT1G19220.1
- Gene Type Coding gene
- Location Chr1 : 6628395-6632779 : negative
Gene Family Information
- ID HOM05D000112
- #Genes/#Species 3032/97
- Phylogenetic origin
- ID ORTHO05D001918
- #Genes/#Species 337/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G19220.1
- symbol ARF19
- Alias ARF11,AUXIN RESPONSE FACTOR11,IAA22,indole-3-acetic acid inducible 22
- uniprot Q8RYC8
Descriptions
- Description auxin response factor 19
- Computational description auxin response factor 19 (ARF19); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), Transcriptional factor B3 (InterPro:IPR003340), AUX/IAA protein (InterPro:IPR003311), Auxin response factor (InterPro:IPR010525); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (TAIR:AT5G20730.2); Has 61717 Blast hits to 31683 proteins in 1304 species: Archae - 12; Bacteria - 3231; Metazoa - 21055; Fungi - 6588; Plants - 6362; Viruses - 195; Other Eukaryotes - 24274 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009851 | ISO | PLAZA Integrative Orthology | auxin biosynthetic process | Solyc07g042260.4 |
| GO:0009725 | IEA | GOA Database | response to hormone | |
| GO:0009725 | IEA | InterPro | response to hormone | |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:0010311 | IGI | Gene Ontology | lateral root formation | 1 |
| GO:0009723 | IMP | Gene Ontology | response to ethylene | 2 |
| GO:0048527 | IGI | Gene Ontology | lateral root development | 3 |
| GO:0048366 | IGI | Gene Ontology | leaf development | 3 |
| GO:0009733 | IMP NAS | Gene Ontology | response to auxin | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 5 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IDA | Gene Ontology | DNA binding | 1 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 6 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 7 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 8 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM TAS | Gene Ontology | nucleus | 1 9 |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |