Gene: Cc03_g02470
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc03_g02470
- Transcript Identifier Cc03_g02470.1
- Gene Type Coding gene
- Location chr3 : 1877982-1883274 : positive
Gene Family Information
- ID HOM05D001702
- #Genes/#Species 381/98
- Phylogenetic origin
- ID ORTHO05D001791
- #Genes/#Species 355/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB Q6C1X5
- UniProtKB Q6PUF9
- UniProtKB B9IYA1
- UniProtKB Q9SQT8
- UniProtKB D2KBA9
- UniProtKB O65917
- id GSCOCG00025893001
Descriptions
- Description Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G06350 |
| GO:0019632 | ISO | PLAZA Integrative Orthology | shikimate metabolic process | AT3G06350 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003855 | IEA | InterPro | 3-dehydroquinate dehydratase activity | |
| GO:0004764 | IEA | InterPro | shikimate 3-dehydrogenase (NADP+) activity | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G06350 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G06350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001381 | 3-dehydroquinate dehydratase type I |
| IPR013708 | Shikimate dehydrogenase substrate binding, N-terminal |
| IPR041121 | SDH, C-terminal |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR013785 | Aldolase-type TIM barrel |
| IPR022893 | Shikimate dehydrogenase family |
| IPR006151 | Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase |
| Mapman id | Description |
|---|---|
| 4.1.5.1.3 | Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase |