Gene: AT3G06350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06350
  • Transcript Identifier AT3G06350.1
  • Gene Type Coding gene
  • Location Chr3 : 1924536-1927701 : negative

Gene Family Information

  • ID HOM05D001702
  • #Genes/#Species 381/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06350.1
  • symbol MEE32
  • Alias EMB3004,EMBRYO DEFECTIVE 3004
  • full_name MATERNAL EFFECT EMBRYO ARREST 32
  • uniprot Q9SQT8

Descriptions

  • Description dehydroquinate dehydratase, putative / shikimate dehydrogenase
  • Computational description MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019632
IEA
GOA Databaseshikimate metabolic process
GO:0019632
IDA
IBA
Gene Ontologyshikimate metabolic process1 2
GO:0019632
IEA
InterProshikimate metabolic process
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0009423
IBA
IEA
Gene Ontologychorismate biosynthetic process2
GO:0009793
IMP
NAS
Gene Ontologyembryo development ending in seed dormancy3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050661
IEA
Gene OntologyNADP binding
GO:0050661
IEA
InterProNADP binding
GO:0004764
IEA
GOA Databaseshikimate 3-dehydrogenase (NADP+) activity
GO:0004764
IDA
IBA
Gene Ontologyshikimate 3-dehydrogenase (NADP+) activity1 2
GO:0004764
IEA
InterProshikimate 3-dehydrogenase (NADP+) activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0003855
IDA
IEA
Gene Ontology3-dehydroquinate dehydratase activity
GO:0003855
IEA
InterPro3-dehydroquinate dehydratase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast4
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma5
GO:0005829
RCA
Gene Ontologycytosol6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
IPR001381 3-dehydroquinate dehydratase type I
IPR013785 Aldolase-type TIM barrel
IPR036291 NAD(P)-binding domain superfamily
IPR011342 Shikimate dehydrogenase
IPR041121 SDH, C-terminal
IPR013708 Shikimate dehydrogenase substrate binding, N-terminal
IPR022893 Shikimate dehydrogenase family
Mapman id Description
4.1.5.1.3 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase