Gene: Carub.0004s2855

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s2855
  • Transcript Identifier Carub.0004s2855.1
  • Gene Type Coding gene
  • Location scaffold_4 : 14156679-14158276 : negative

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s2855.v1.1
  • pacid 39237418
  • synonym Carubv10023431m.g

Descriptions

  • Description PTHR31500:SF10 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G45850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR017956 AT hook, DNA-binding motif
IPR039605 AT-hook motif nuclear-localized protein
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)