Gene: Carub.0004s1776
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s1776
- Transcript Identifier Carub.0004s1776.1
- Gene Type Coding gene
- Location scaffold_4 : 10066258-10069816 : positive
Gene Family Information
- ID HOM05D001423
- #Genes/#Species 441/100
- Phylogenetic origin
- ID ORTHO05D001412
- #Genes/#Species 412/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0004s1776.v1.1
- pacid 39239012
- synonym Carubv10022932m.g
Descriptions
- Description K06620 - transcription factor E2F3 (E2F3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G36010 |
| GO:0051446 | ISO | PLAZA Integrative Orthology | positive regulation of meiotic cell cycle | AT2G36010 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000978 | IEA | InterPro | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT2G36010 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G36010 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005667 | IEA | InterPro | transcription regulator complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
| IPR032198 | E2F transcription factor, CC-MB domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR015633 | E2F Family |
| IPR037241 | E2F-DP heterodimerization region |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 13.1.2.1.4.1 | Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.E2F-DP dimer.component E2F |
| 15.5.10 | RNA biosynthesis.transcriptional regulation.transcription factor (E2F) |