Gene: Carub.0001s4481

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s4481
  • Transcript Identifier Carub.0001s4481.1
  • Gene Type Coding gene
  • Location scaffold_1 : 19580151-19582911 : negative

Gene Family Information

  • ID HOM05D001534
  • #Genes/#Species 415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s4481.v1.1
  • pacid 39231054
  • synonym Carubv10012037m.g

Descriptions

  • Description K03131 - transcription initiation factor TFIID subunit 6 (TAF6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016251
IEA
InterProRNA polymerase II general transcription initiation factor activity
GO:0046982
IEA
InterProprotein heterodimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000124
IEA
InterProSAGA complex
GO:0005669
IEA
InterProtranscription factor TFIID complex
GO:0046695
IEA
InterProSLIK (SAGA-like) complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037796 Transcription initiation factor TFIID subunit 6
IPR004823 TATA box binding protein associated factor (TAF)
IPR009072 Histone-fold
IPR016024 Armadillo-type fold
IPR011442 TAF6, C-terminal HEAT repeat domain
Mapman id Description
15.3.4.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF6