Gene: CSS0040897
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0040897
- Transcript Identifier CSS0040897.1
- Gene Type Coding gene
- Location Chr1 : 214629396-214635523 : negative
Gene Family Information
- ID HOM05D005823
- #Genes/#Species 134/93
- Phylogenetic origin
- ID ORTHO05D007536
- #Genes/#Species 129/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0040897.1
Descriptions
- Description PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic isoform X1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006470 | IEA | InterPro | protein dephosphorylation | |
| GO:0005983 | IEA | InterPro | starch catabolic process | |
| GO:0016311 | IEA | InterPro | dephosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008138 | IEA | InterPro | protein tyrosine/serine/threonine phosphatase activity | |
| GO:0019203 | ISO | PLAZA Integrative Orthology | carbohydrate phosphatase activity | AT3G01510 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G01510 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G01510 |
| GO:0043036 | ISO | PLAZA Integrative Orthology | starch grain | AT3G01510 |
| GO:0009569 | ISO | PLAZA Integrative Orthology | chloroplast starch grain | AT3G01510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029021 | Protein-tyrosine phosphatase-like |
| IPR013783 | Immunoglobulin-like fold |
| IPR020422 | Dual specificity protein phosphatase domain |
| IPR030066 | Putative phosphatase LSF1, chloroplastic |
| IPR014756 | Immunoglobulin E-set |
| IPR032640 | AMP-activated protein kinase, glycogen-binding domain |
| IPR000340 | Dual specificity phosphatase, catalytic domain |
| Mapman id | Description |
|---|---|
| 3.2.3.2.3 | Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.alpha-amylase-binding scaffold protein (LSF1) |