Gene: CSS0035767
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0035767
- Transcript Identifier CSS0035767.1
- Gene Type Coding gene
- Location Chr6 : 44914597-44918147 : positive
Gene Family Information
- ID HOM05D001300
- #Genes/#Species 483/99
- Phylogenetic origin
- ID ORTHO05D004991
- #Genes/#Species 166/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0035767.1
Descriptions
- Description PREDICTED: asparagine--tRNA ligase, cytoplasmic 1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006421 | IEA | InterPro | asparaginyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G56680 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G56680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004816 | IEA | InterPro | asparagine-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G56680 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G56680 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G56680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004522 | Asparagine-tRNA ligase |
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| IPR002312 | Aspartyl/Asparaginyl-tRNA synthetase, class IIb |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR009068 | S15/NS1, RNA-binding |
| IPR000738 | WHEP-TRS domain |
| Mapman id | Description |
|---|---|
| 17.2.3 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase |