Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0036126 PREDICTED: asparagine--tRNA ligase, cytoplasmic 1 [Vitis vinifera] Chr14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G12520 LG-3 + View
Actinidia chinensis Actinidia25280 Lachesis_group18 + View
Actinidia chinensis Actinidia39751 Lachesis_group5 + View
Avicennia marina MSTRG.6035 ScioBoG_102839_HRSCAF_103093 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3DM8EN PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VDI6YU K01893 - asparaginyl-tRNA synthetase (NARS, asnS) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EPEJ84 K01893 - asparaginyl-tRNA synthetase (NARS, asnS) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4908EN K01893 - asparaginyl-tRNA synthetase (NARS, asnS) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G56680 Class II aminoacyl-tRNA and biotin synthetases superfamily protein Encodes a putative cytosolic asparaginyl-tRNA synthetase. SYNC1%3B FUNCTIONS IN: in 6 functions%3B INVOLVED IN: response to cadmium ion%2C embryo development ending in seed dormancy%3B LOCATED IN: mitochondrion%2C chloroplast%3B EXPRESSED IN: cotyledon%2C guard cell%2C cultured cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type (InterPro:IPR004365)%2C Asparaginyl-tRNA synthetase%2C class IIb (InterPro:IPR004522)%2C WHEP-TRS (InterPro:IPR000738)%2C Aminoacyl-tRNA synthetase%2C class II%2C conserved domain (InterPro:IPR006195)%2C Aspartyl/Asparaginyl-tRNA synthetase%2C class IIb (InterPro:IPR002312)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Aminoacyl-tRNA synthetase%2C class II (D/K/N) (InterPro:IPR004364)%2C Aminoacyl-tRNA synthetase%2C class II (D/K/N)-like (InterPro:IPR018150)%3B BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1)%3B Has 19343 Blast hits to 13725 proteins in 2674 species: Archae - 682%3B Bacteria - 14860%3B Metazoa - 615%3B Fungi - 765%3B Plants - 223%3B Viruses - 0%3B Other Eukaryotes - 2198 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB01g04415 ChrB01 + View
Brassica carinata BcaB08g36069 ChrB08 - View
Brassica carinata BcaC01g06442 ChrC01 + View
Brassica carinata BcaC04g20061 ChrC04 - View
Brassica napus A03p13240 A03 - View
Brassica napus A10p14040 A10 + View
Brassica napus C09p48270 C09 + View
Brassica oleracea BolC9t57677H C9 + View
Brassica rapa BraA10t43495Z A10 + View
Brassica rapa BraA03t10636Z A03 - View
Corylus avellana Haze_25863 Similar to SYNC1: Asparagine--tRNA ligase, cytoplasmic 1 (Arabidopsis thaliana OX%3D3702) 8 + View
Citrus clementina Ciclev10007872m.g scaffold_1 + View
Carpinus fangiana Cfa003139 Cfa01 - View
Cardamine hirsuta CARHR270370 Asparagine--tRNA ligase Chr8 + View
Carya illinoinensis CiPaw.03G220200 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Chr03 - View
Corchorus olitorius COL.COLO4_18254 Aminoacyl-tRNA synthetase%2C class II (D/K/N) AWUE01016436.1 - View
Capsella rubella Carub.0008s1715 K01893 - asparaginyl-tRNA synthetase (NARS, asnS) scaffold_8 + View
Daucus carota DCAR_010685 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv36728 GWHABJS00000001 + View
Davidia involucrata Dinv42285 GWHABJS00000013 + View
Durio zibethinus Duzib187G1049 NW_019167860.1 + View
Durio zibethinus Duzib150G0351 NW_019167882.1 - View
Durio zibethinus Duzib168G0161 NW_019168159.1 - View
Eucalyptus grandis Eucgr.C00933 Chr03 - View
Eutrema salsugineum Thhalv10013096m.g 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase scaffold_2 - View
Gossypium hirsutum Gohir.A06G070200 K01893 - asparaginyl-tRNA synthetase (NARS, asnS) A06 + View
Gossypium hirsutum Gohir.A08G244350 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED A08 + View
Gossypium hirsutum Gohir.D08G265250 6.1.1.22 - Asparagine--tRNA ligase / Asparaginyl-tRNA synthetase D08 + View
Gossypium hirsutum Gohir.D06G068800 K01893 - asparaginyl-tRNA synthetase (NARS, asnS) D06 + View
Glycine max Glyma.05G224000 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Gm05 - View
Glycine max Glyma.08G031100 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Gm08 - View
Gossypium raimondii Gorai.004G283200 Chr04 + View
Gossypium raimondii Gorai.010G080400 Chr10 + View
Hydrangea macrophylla Hma1.2p1_0663F.1_g198630 Hma1.2p1_0663F.1 + View
Lupinus albus Lalb_Chr22g0349811 PTHR22594//PTHR22594:SF34 - ASPARTYL/LYSYL-TRNA SYNTHETASE // ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Lalb_Chr22 - View
Lotus japonicus Lj4g0012236 K01893 - asparaginyl-tRNA synthetase (NARS, asnS) chr4 + View
Lonicera japonica Lj7A670G56 GWHAAZE00000007 + View
Manihot esculenta Manes.03G030200 Chromosome03 + View
Medicago truncatula Medtr8g102050 cytoplasmic asparagine-tRNA ligase chr8 + View
Olea europaea Oeu000333.1 chr17 + View
Olea europaea Oeu021466.2 chr2 - View
Populus trichocarpa Potri.006G153900 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Chr06 - View
Phaseolus vulgaris Phvul.002G305800 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Chr02 - View
Rhododendron simsii Rhsim05G0030300 chr05 + View
Salix brachista Sabra06G0122100 GWHAAZH00000006 - View
Schrenkiella parvula Sp6g18450 PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED ch6-6 + View
Theobroma cacao Thecc.09G095000 Class II aminoacyl-tRNA and biotin synthetases superfamily protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104811732 asparagine--tRNA ligase%2C cytoplasmic 1 NW_010965372.1 + View
Trifolium pratense TPR.G25444 Tp57577_TGAC_v2_scaf_162 - View
Tripterygium wilfordii TWI32G0576 NC_052254.1 + View
Tripterygium wilfordii TWI63G1460 NC_052240.1 + View
Vigna mungo VMungo0251G2154 CM024069.1 - View
Vitis vinifera GSVIVG01015254001 chr11 - View