Gene: CSS0029173

General Information

Structural Information

Species Camellia sinensis var. sinensis
Gene Identifier CSS0029173
Transcript Identifier CSS0029173.1
Gene Type Coding gene
Location Contig854 : 207686-211490 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006561
#Genes/#Species 122/94
Phylogenetic origin

ID ORTHO05D008097
#Genes/#Species 123/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid CSS0029173.1

Descriptions

Short descriptions
Ortholog descriptions

Description PREDICTED: E3 SUMO-protein ligase MMS21 isoform X2 [Prunus mume]

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000724	IEA	InterPro	double-strand break repair via homologous recombination
GO:0048509	ISO	PLAZA Integrative Orthology	regulation of meristem development	AT3G15150
GO:0010082	ISO	PLAZA Integrative Orthology	regulation of root meristem growth	AT3G15150
GO:0016925	ISO	PLAZA Integrative Orthology	protein sumoylation	AT3G15150
GO:0060250	ISO	PLAZA Integrative Orthology	germ-line stem-cell niche homeostasis	AT3G15150
GO:0008284	ISO	PLAZA Integrative Orthology	positive regulation of cell population proliferation	AT3G15150
GO:0080038	ISO	PLAZA Integrative Orthology	positive regulation of cytokinin-activated signaling pathway	AT3G15150
GO:0006974	ISO	PLAZA Integrative Orthology	cellular response to DNA damage stimulus	AT3G15150
GO:0032876	ISO	PLAZA Integrative Orthology	negative regulation of DNA endoreduplication	AT3G15150
GO:0045931	ISO	PLAZA Integrative Orthology	positive regulation of mitotic cell cycle	AT3G15150

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0019789	IEA	InterPro	SUMO transferase activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G15150

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030915	IEA	InterPro	Smc5-Smc6 complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G15150

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR004181	Zinc finger, MIZ-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR026846	E3 SUMO-protein ligase Nse2 (Mms21)

Mapman id	Description
14.3.6.1.3	DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.SUMO-ligase component HYP2/NSE2
19.2.2.2.4.2	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (HPY2/NSE2)