Gene: AT3G15150

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G15150
  • Transcript Identifier AT3G15150.1
  • Gene Type Coding gene
  • Location Chr3 : 5102210-5104082 : negative

Gene Family Information

  • ID HOM05D006561
  • #Genes/#Species 122/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G15150.1
  • symbol HPY2
  • Alias ATMMS21,A. THALIANA METHYL METHANE SULFONATE SENSITIVITY 21,MMS21,METHYL METHANE SULFONATE SENSITIVITY 2
  • full_name HIGH PLOIDY2
  • uniprot Q8GYH7

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description HIGH PLOIDY2 (HPY2); Has 268 Blast hits to 268 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 53; Plants - 46; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009736
IEA
GOA Databasecytokinin-activated signaling pathway
GO:0000724
IEA
GOA Databasedouble-strand break repair via homologous recombination
GO:0000724
IBA
Gene Ontologydouble-strand break repair via homologous recombination1
GO:0000724
IEA
InterProdouble-strand break repair via homologous recombination
GO:0007049
IEA
GOA Databasecell cycle
GO:0016925
IDA
IBA
IEA
Gene Ontologyprotein sumoylation1 2
GO:0060250
IMP
Gene Ontologygerm-line stem-cell niche homeostasis3
GO:0006974
IMP
Gene Ontologycellular response to DNA damage stimulus3
GO:0080038
IMP
Gene Ontologypositive regulation of cytokinin-activated signaling pathway2
GO:0045931
IMP
Gene Ontologypositive regulation of mitotic cell cycle2
GO:0010082
IMP
Gene Ontologyregulation of root meristem growth2
GO:0008284
IMP
Gene Ontologypositive regulation of cell population proliferation2
GO:0048509
IMP
Gene Ontologyregulation of meristem development4
GO:0032876
IMP
Gene Ontologynegative regulation of DNA endoreduplication4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061665
IBA
Gene OntologySUMO ligase activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0019789
IEA
GOA DatabaseSUMO transferase activity
GO:0019789
IDA
Gene OntologySUMO transferase activity4
GO:0019789
IEA
InterProSUMO transferase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030915
IEA
GOA DatabaseSmc5-Smc6 complex
GO:0030915
IBA
Gene OntologySmc5-Smc6 complex1
GO:0030915
IEA
InterProSmc5-Smc6 complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004181 Zinc finger, MIZ-type
IPR026846 E3 SUMO-protein ligase Nse2 (Mms21)
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
14.3.6.1.3 DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.SUMO-ligase component HYP2/NSE2
19.2.2.2.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (HPY2/NSE2)