Gene: CSS0009558
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0009558
- Transcript Identifier CSS0009558.1
- Gene Type Coding gene
- Location Contig61 : 583684-595297 : negative
Gene Family Information
- ID HOM05D001423
- #Genes/#Species 441/100
- Phylogenetic origin
- ID ORTHO05D001412
- #Genes/#Species 412/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0009558.1
Descriptions
- Description PREDICTED: transcription factor E2FC isoform X1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010767 | ISO | PLAZA Integrative Orthology | regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage | AT1G47870 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT1G47870 |
| GO:0051782 | ISO | PLAZA Integrative Orthology | negative regulation of cell division | AT1G47870 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT1G47870 |
| GO:0042023 | ISO | PLAZA Integrative Orthology | DNA endoreduplication | AT1G47870 |
| GO:0043068 | ISO | PLAZA Integrative Orthology | positive regulation of programmed cell death | AT1G47870 |
| GO:0000902 | ISO | PLAZA Integrative Orthology | cell morphogenesis | AT1G47870 |
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046982 | ISO | PLAZA Integrative Orthology | protein heterodimerization activity | AT1G47870 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G47870 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT1G47870 |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT1G47870 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G47870 |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000978 | IEA | InterPro | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G47870 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G47870 |
| GO:0005667 | IEA | InterPro | transcription regulator complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR037241 | E2F-DP heterodimerization region |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR003316 | E2F/DP family, winged-helix DNA-binding domain |
| IPR015633 | E2F Family |
| IPR032198 | E2F transcription factor, CC-MB domain |
| Mapman id | Description |
|---|---|
| 13.1.2.1.4.1 | Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.E2F-DP dimer.component E2F |
| 15.5.10 | RNA biosynthesis.transcriptional regulation.transcription factor (E2F) |