Gene: CSS0000004
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0000004
- Transcript Identifier CSS0000004.1
- Gene Type Coding gene
- Location Chr11 : 16967813-16978922 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0000004.1
Descriptions
- Description Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012337 | Ribonuclease H-like superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR041588 | Integrase zinc-binding domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR041373 | Reverse transcriptase, RNase H-like domain |
| IPR001584 | Integrase, catalytic core |
| IPR025724 | GAG-pre-integrase domain |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |