Gene: COL.COLO4_35076

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_35076
  • Transcript Identifier COL.rna33765
  • Gene Type Coding gene
  • Location AWUE01022487.1 : 149358-150760 : positive

Gene Family Information

  • ID HOM05D002722
  • #Genes/#Species 253/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna33765
  • GenBank OMO57823.1
  • id gene35048
  • gene_name COLO4_35076
  • uniprot A0A1R3GI99

Descriptions

  • Description Ribosomal biogenesis, methyltransferase, EMG1/NEP1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0032259
IEA
GOA Databasemethylation
GO:0070475
IEA
GOA DatabaserRNA base methylation
GO:0070475
IEA
InterProrRNA base methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0070037
IEA
GOA DatabaserRNA (pseudouridine) methyltransferase activity
GO:0070037
IEA
InterProrRNA (pseudouridine) methyltransferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029028 Alpha/beta knot methyltransferases
IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR005304 Ribosomal biogenesis, methyltransferase, EMG1/NEP1
Mapman id Description
35.1 not assigned.annotated