Gene: COL.COLO4_32624

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_32624
  • Transcript Identifier COL.rna31334
  • Gene Type Coding gene
  • Location AWUE01021138.1 : 4659-6352 : positive

Gene Family Information

  • ID HOM05D003015
  • #Genes/#Species 229/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna31334
  • GenBank OMO63239.1
  • id gene32596
  • gene_name COLO4_32624
  • uniprot A0A1R3GYR7

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G07360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G29580
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G07060
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G29580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G07360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039171 Pre-mRNA-splicing factor Cwc2/Slt11
IPR036855 Zinc finger, CCCH-type superfamily
IPR032297 Torus domain
IPR000504 RNA recognition motif domain
IPR000571 Zinc finger, CCCH-type
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.5.2.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component MAC5