Gene: COL.COLO4_31494

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31494
  • Transcript Identifier COL.rna30209
  • Gene Type Coding gene
  • Location AWUE01020855.1 : 140797-149330 : positive

Gene Family Information

  • ID HOM05D005098
  • #Genes/#Species 147/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30209
  • GenBank OMO65176.1
  • id gene31466
  • gene_name COLO4_31494
  • uniprot A0A1R3H4M6

Descriptions

  • Description Transcription factor TFIIH subunit p52/Tfb2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001671
IEA
GOA DatabaseATPase activator activity
GO:0001671
IEA
InterProATPase activator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0000439
IEA
GOA Databasetranscription factor TFIIH core complex
GO:0000439
IEA
InterProtranscription factor TFIIH core complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040662 Transcription factor Tfb2, C-terminal domain
IPR004598 Transcription factor TFIIH subunit p52/Tfb2
Mapman id Description
14.6.3.2.5 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB2
15.3.3.5.1.5 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB2