Gene: COL.COLO4_31201
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_31201
- Transcript Identifier COL.rna29916
- Gene Type Coding gene
- Location AWUE01020828.1 : 230253-234662 : negative
Gene Family Information
- ID HOM05D004199
- #Genes/#Species 168/94
- Phylogenetic origin
- ID ORTHO05D005905
- #Genes/#Species 150/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna29916
- GenBank OMO65530.1
- id gene31173
- gene_name COLO4_31201
- uniprot A0A1R3H5I9
Descriptions
- Description GC-rich sequence DNA-binding factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G08550 |
| GO:0042023 | ISO | PLAZA Integrative Orthology | DNA endoreduplication | AT5G08550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0030371 | ISO | PLAZA Integrative Orthology | translation repressor activity | AT5G08550 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.7.3.1 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.component ILP1 |