Gene: AT5G08550
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G08550
- Transcript Identifier AT5G08550.1
- Gene Type Coding gene
- Location Chr5 : 2765981-2770282 : negative
Gene Family Information
- ID HOM05D004199
- #Genes/#Species 168/94
- Phylogenetic origin
- ID ORTHO05D005905
- #Genes/#Species 150/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G08550.1
- symbol ILP1
- full_name increased level of polyploidy1-1D
- uniprot Q9FNN3
Descriptions
- Description GC-rich sequence DNA-binding factor-like protein
- Computational description increased level of polyploidy1-1D (ILP1); CONTAINS InterPro DOMAIN/s: GC-rich sequence DNA-binding factor-like (InterPro:IPR012890); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein (TAIR:AT5G09210.1); Has 786 Blast hits to 745 proteins in 186 species: Archae - 2; Bacteria - 46; Metazoa - 439; Fungi - 95; Plants - 69; Viruses - 1; Other Eukaryotes - 134 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042023 | IMP | Gene Ontology | DNA endoreduplication | 1 |
| GO:0045892 | IDA | Gene Ontology | negative regulation of transcription, DNA-templated | 1 |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IMP | Gene Ontology | mRNA splicing, via spliceosome | 2 |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0017148 | IEA | GOA Database | negative regulation of translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0030371 | IDA | Gene Ontology | translation repressor activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 3 |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.7.3.1 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.Intron-Lariat Spliceosome (ILS) complex.component ILP1 |