Gene: COL.COLO4_27762

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_27762
  • Transcript Identifier COL.rna26485
  • Gene Type Coding gene
  • Location AWUE01019685.1 : 59484-73809 : positive

Gene Family Information

  • ID HOM05D003438
  • #Genes/#Species 198/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna26485
  • GenBank OMO72203.1
  • id gene27734
  • gene_name COLO4_27762
  • uniprot A0A1R3HPF2

Descriptions

  • Description Menaquinone biosynthesis protein MenD
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009063
IEA
GOA Databasecellular amino acid catabolic process
GO:0009234
IEA
GOA Databasemenaquinone biosynthetic process
GO:0009234
IEA
InterPromenaquinone biosynthetic process
GO:0042372
ISO
PLAZA Integrative Orthologyphylloquinone biosynthetic process AT1G68890
GO:0042550
ISO
PLAZA Integrative Orthologyphotosystem I stabilization AT1G68890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0070204
IEA
GOA Database2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity
GO:0070204
IEA
InterPro2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0030976
IEA
GOA Databasethiamine pyrophosphate binding
GO:0030976
IEA
InterProthiamine pyrophosphate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029017 Enolase-like, N-terminal
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
IPR032264 Menaquinone biosynthesis protein MenD, middle domain
IPR029065 Enolase C-terminal domain-like
IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding
IPR029061 Thiamin diphosphate-binding fold
IPR036849 Enolase-like, C-terminal domain superfamily
IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal
IPR000073 Alpha/beta hydrolase fold-1
IPR029058 Alpha/Beta hydrolase fold
IPR029035 DHS-like NAD/FAD-binding domain superfamily
Mapman id Description
7.14.3 Coenzyme metabolism.phylloquinone biosynthesis.multifunctional phylloquinone biosynthesis protein (PHYLLO)