Gene: COL.COLO4_19774

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_19774
  • Transcript Identifier COL.rna18536
  • Gene Type Coding gene
  • Location AWUE01016790.1 : 687-3149 : positive

Gene Family Information

  • ID HOM05D001138
  • #Genes/#Species 543/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna18536
  • GenBank OMO89391.1
  • id gene19746
  • gene_name COLO4_19774
  • uniprot A0A1R3J3H5

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G17330
GO:0006807
ISO
PLAZA Integrative Orthologynitrogen compound metabolic process AT1G65960
GO:0006536
IEA
GOA Databaseglutamate metabolic process
GO:0006536
IEA
InterProglutamate metabolic process
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT1G65960
GO:0004351
IEA
GOA Databaseglutamate decarboxylase activity
GO:0004351
IEA
InterProglutamate decarboxylase activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G17330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
IPR002129 Pyridoxal phosphate-dependent decarboxylase
IPR010107 Glutamate decarboxylase
Mapman id Description
4.1.1.1.3.1 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase