Gene: AT1G65960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G65960
  • Transcript Identifier AT1G65960.2
  • Gene Type Coding gene
  • Location Chr1 : 24552094-24557253 : positive

Gene Family Information

  • ID HOM05D001138
  • #Genes/#Species 543/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G65960.2
  • symbol GAD2
  • uniprot Q42472

Descriptions

  • Description glutamate decarboxylase 2
  • Computational description glutamate decarboxylase 2 (GAD2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 2686 Blast hits to 2683 proteins in 834 species: Archae - 189; Bacteria - 1522; Metazoa - 142; Fungi - 352; Plants - 304; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink).
  • Computational description glutamate decarboxylase 2 (GAD2); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase (TAIR:AT5G17330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006536
IDA
IEA
Gene Ontologyglutamate metabolic process1
GO:0006536
IEA
InterProglutamate metabolic process
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0006538
IBA
Gene Ontologyglutamate catabolic process2
GO:0006807
TAS
Gene Ontologynitrogen compound metabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0004351
IDA
IBA
IEA
Gene Ontologyglutamate decarboxylase activity1 2
GO:0004351
IEA
InterProglutamate decarboxylase activity
GO:0030170
IEA
Gene Ontologypyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005516
TAS
Gene Ontologycalmodulin binding4
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
IBA
Gene Ontologycytosol2 5
GO:0005634
HDA
Gene Ontologynucleus6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR002129 Pyridoxal phosphate-dependent decarboxylase
IPR010107 Glutamate decarboxylase
IPR015424 Pyridoxal phosphate-dependent transferase
Mapman id Description
4.1.1.1.3.1 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase