Gene: AT5G17330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G17330
  • Transcript Identifier AT5G17330.1
  • Gene Type Coding gene
  • Location Chr5 : 5711141-5714839 : positive

Gene Family Information

  • ID HOM05D001138
  • #Genes/#Species 543/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G17330.1
  • symbol GAD
  • Alias AtGAD1,GAD1,GLUTAMATE DECARBOXYLASE 1
  • uniprot Q42521

Descriptions

  • Description glutamate decarboxylase
  • Computational description glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009448
ISO
PLAZA Integrative Orthologygamma-aminobutyric acid metabolic process Solyc03g098240.3
GO:0006536
IEA
GOA Databaseglutamate metabolic process
GO:0006536
IEA
InterProglutamate metabolic process
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0006538
IBA
Gene Ontologyglutamate catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016829
IEA
GOA Databaselyase activity
GO:0004351
IEA
GOA Databaseglutamate decarboxylase activity
GO:0004351
IDA
IBA
Gene Ontologyglutamate decarboxylase activity1 2
GO:0004351
IEA
InterProglutamate decarboxylase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
IEA
Gene Ontologypyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016830
IEA
InterProcarbon-carbon lyase activity
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005516
IDA, IPI
TAS
Gene Ontologycalmodulin binding2 3
GO:0016831
IEA
GOA Databasecarboxy-lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
IBA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002129 Pyridoxal phosphate-dependent decarboxylase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR010107 Glutamate decarboxylase
IPR015424 Pyridoxal phosphate-dependent transferase
Mapman id Description
4.1.1.1.3.1 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase