Gene: COL.COLO4_19722
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_19722
- Transcript Identifier COL.rna18485
- Gene Type Coding gene
- Location AWUE01016743.1 : 12507-16394 : positive
Gene Family Information
- ID HOM05D001008
- #Genes/#Species 601/100
- Phylogenetic origin
- ID ORTHO05D003146
- #Genes/#Species 241/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna18485
- GenBank OMO89517.1
- id gene19694
- gene_name COLO4_19722
- uniprot A0A1R3J3W1
Descriptions
- Description 6-phosphogluconate dehydrogenase, NADP-binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G25530 |
| GO:0009448 | ISO | PLAZA Integrative Orthology | gamma-aminobutyric acid metabolic process | Solyc09g018790.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0051287 | IEA | GOA Database | NAD binding | |
| GO:0051287 | IEA | InterPro | NAD binding | |
| GO:0050661 | IEA | GOA Database | NADP binding | |
| GO:0050661 | IEA | InterPro | NADP binding | |
| GO:0003858 | ISO | PLAZA Integrative Orthology | 3-hydroxybutyrate dehydrogenase activity | AT3G25530 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G25530 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029154 | 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain |
| IPR013328 | 6-phosphogluconate dehydrogenase, domain 2 |
| IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily |
| IPR006115 | 6-phosphogluconate dehydrogenase, NADP-binding |
| IPR015815 | 3-hydroxyisobutyrate dehydrogenase-related |
| IPR036291 | NAD(P)-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 4.2.2.3.1 | Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).gamma-hydroxybutyrate formation.bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase |