Gene: COL.COLO4_12328

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_12328
  • Transcript Identifier COL.rna11119
  • Gene Type Coding gene
  • Location AWUE01014906.1 : 23366-30740 : negative

Gene Family Information

  • ID HOM05D001978
  • #Genes/#Species 334/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna11119
  • GenBank OMP00816.1
  • id gene12300
  • gene_name COLO4_12328
  • uniprot A0A1R3K163

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G63460
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G63460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR040251 Protein transport protein SEC31-like
IPR024298 Ancestral coatomer element 1, Sec16/Sec31
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
Mapman id Description
22.1.1.1.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.scaffolding component Sec31