Gene: CBR_g30116
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g30116
- Transcript Identifier GBG79851
- Gene Type Coding gene
- Location BFEA01000330 : 16325-107963 : positive
Gene Family Information
- ID HOM05D000019
- #Genes/#Species 6761/20
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG79851
- uniprot A0A388LC17
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019288 | IEA | GOA Database | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | |
| GO:0019288 | IEA | InterPro | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | |
| GO:0050992 | IEA | GOA Database | dimethylallyl diphosphate biosynthetic process | |
| GO:0050992 | IEA | InterPro | dimethylallyl diphosphate biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0051745 | IEA | GOA Database | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | |
| GO:0051745 | IEA | InterPro | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | |
| GO:0051539 | IEA | GOA Database | 4 iron, 4 sulfur cluster binding | |
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR041588 | Integrase zinc-binding domain |
| IPR003451 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| IPR000477 | Reverse transcriptase domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| Mapman id | Description |
|---|---|
| 9.1.2.8 | Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-hydroxy-3-methylbut-2-enyl diphosphate reductase |