Gene: CARHR216260
General Information
Structural Information
- Species Cardamine hirsuta
- Gene Identifier CARHR216260
- Transcript Identifier CARHR216260.1
- Gene Type Coding gene
- Location Chr7 : 3396343-3397103 : negative
Gene Family Information
- ID HOM05D003452
- #Genes/#Species 198/94
- Phylogenetic origin
- ID ORTHO05D004046
- #Genes/#Species 193/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CARHR216260.1
Descriptions
- Description Small RNA degrading nuclease 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010587 | ISO | PLAZA Integrative Orthology | miRNA catabolic process | AT3G50100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0035198 | ISO | PLAZA Integrative Orthology | miRNA binding | AT3G50100 |
| GO:0044748 | ISO | PLAZA Integrative Orthology | 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing | AT3G50100 |
| GO:0008408 | ISO | PLAZA Integrative Orthology | 3'-5' exonuclease activity | AT3G50100 |
| GO:0000175 | ISO | PLAZA Integrative Orthology | 3'-5'-exoribonuclease activity | AT3G50100 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT5G67240 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036397 | Ribonuclease H superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |