Gene: BraA02t05621Z

General Information

Structural Information

  • Species Brassica rapa
  • Gene Identifier BraA02t05621Z
  • Transcript Identifier BraA02t05621Z
  • Gene Type Coding gene
  • Location A02 : 4383591-4388216 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • uniprot A0A3P6A9G3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:1904159
ISO
PLAZA Integrative Orthologymegasporocyte differentiation AT5G21150
GO:0010529
ISO
PLAZA Integrative Orthologynegative regulation of transposition AT5G21150
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT5G21150
GO:0009554
ISO
PLAZA Integrative Orthologymegasporogenesis AT5G21150
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G21150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0035197
ISO
PLAZA Integrative OrthologysiRNA binding AT5G21150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G21150
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G21150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003100 PAZ domain
IPR014811 Argonaute, linker 1 domain
IPR012337 Ribonuclease H-like superfamily
IPR003165 Piwi domain
IPR036085 PAZ domain superfamily
IPR032474 Protein argonaute, N-terminal
IPR036397 Ribonuclease H superfamily
IPR032472 Argonaute linker 2 domain
Mapman id Description
12.5.1.13 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO)