Gene: BcaC05g28317
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC05g28317
- Transcript Identifier BcaC05g28317
- Gene Type Coding gene
- Location ChrC05 : 46429062-46435021 : negative
Gene Family Information
- ID HOM05D002112
- #Genes/#Species 316/100
- Phylogenetic origin
- ID ORTHO05D005377
- #Genes/#Species 159/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006520 | IEA | InterPro | cellular amino acid metabolic process | |
| GO:0006207 | IEA | InterPro | 'de novo' pyrimidine nucleobase biosynthetic process | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006869 | ISO | PLAZA Integrative Orthology | lipid transport | AT3G20320 |
| GO:0032365 | ISO | PLAZA Integrative Orthology | intracellular lipid transport | AT3G20320 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016597 | IEA | InterPro | amino acid binding | |
| GO:0016743 | IEA | InterPro | carboxyl- or carbamoyltransferase activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0004070 | IEA | InterPro | aspartate carbamoyltransferase activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005319 | ISO | PLAZA Integrative Orthology | lipid transporter activity | AT3G20320 |
| GO:0005543 | ISO | PLAZA Integrative Orthology | phospholipid binding | AT3G20320 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009706 | ISO | PLAZA Integrative Orthology | chloroplast inner membrane | AT3G20320 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G20320 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G20320 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT3G20320 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036901 | Aspartate/ornithine carbamoyltransferase superfamily |
| IPR016177 | DNA-binding domain superfamily |
| IPR039342 | Protein TRIGALACTOSYLDIACYLGLYCEROL 2-like |
| IPR002082 | Aspartate carbamoyltransferase |
| IPR006130 | Aspartate/ornithine carbamoyltransferase |
| IPR001471 | AP2/ERF domain |
| IPR036955 | AP2/ERF domain superfamily |
| IPR003399 | Mce/MlaD |
| IPR006132 | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding |
| IPR006131 | Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain |
| Mapman id | Description |
|---|---|
| 15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |
| 5.8.2.2.2 | Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.TGD lipid importer complex.substrate binding component TGD2 |
| 6.2.1.2 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.aspartate transcarbamoylase |