Gene: AT1G63990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G63990
  • Transcript Identifier AT1G63990.1
  • Gene Type Coding gene
  • Location Chr1 : 23743323-23745351 : negative

Gene Family Information

  • ID HOM05D001458
  • #Genes/#Species 433/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G63990.1
  • symbol SPO11-2
  • uniprot Q9M4A1

Descriptions

  • Description sporulation 11-2
  • Computational description sporulation 11-2 (SPO11-2); FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding; INVOLVED IN: in 11 processes; LOCATED IN: chromosome; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 890 Blast hits to 889 proteins in 304 species: Archae - 214; Bacteria - 14; Metazoa - 169; Fungi - 107; Plants - 162; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007131
IBA
Gene Ontologyreciprocal meiotic recombination1
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0051321
IMP
Gene Ontologymeiotic cell cycle2
GO:0042138
IGI
IBA
IEA
Gene Ontologymeiotic DNA double-strand break formation1 3
GO:0042138
IEA
InterPromeiotic DNA double-strand break formation
GO:0006259
IEA
Gene OntologyDNA metabolic process
GO:0006259
IEA
InterProDNA metabolic process
GO:0000706
IBA
Gene Ontologymeiotic DNA double-strand break processing1
GO:0051026
IMP
Gene Ontologychiasma assembly4
GO:0048437
IMP
Gene Ontologyfloral organ development2
GO:0048316
IMP
Gene Ontologyseed development2
GO:0009555
IMP
Gene Ontologypollen development2
GO:0009553
IMP
Gene Ontologyembryo sac development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0003677
IBA
IEA
Gene OntologyDNA binding1
GO:0003677
IEA
InterProDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005524
IEA
Gene OntologyATP binding
GO:0005524
IEA
InterProATP binding
GO:0003918
IEA
Gene OntologyDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000228
IBA
Gene Ontologynuclear chromosome1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005694
IEA
Gene Ontologychromosome
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013049 Spo11/DNA topoisomerase VI, subunit A, N-terminal
IPR002815 Spo11/DNA topoisomerase VI subunit A
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR034136 Topoisomerase 6 subunit A/Spo11, TOPRIM domain
IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily
Mapman id Description
13.3.5.2.1.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break initiation.meiotic topoisomerase-VI complex.component a/SPO11