Gene: Aa31LG3G17710
General Information
Structural Information
- Species Aethionema arabicum
- Gene Identifier Aa31LG3G17710
- Transcript Identifier Aa31LG3G17710.mRNA1
- Gene Type Coding gene
- Location LG-3 : 11878985-11886538 : positive
Gene Family Information
- ID HOM05D003132
- #Genes/#Species 219/97
- Phylogenetic origin
- ID ORTHO05D003736
- #Genes/#Species 207/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Aa31LG3G17710.mRNA1
- Alias Aa31LG3G17710
- Alias Aa31LG3G17710-mRNA-1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0000919 | ISO | PLAZA Integrative Orthology | cell plate assembly | AT3G19770 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G19770 |
| GO:0045324 | ISO | PLAZA Integrative Orthology | late endosome to vacuole transport | AT3G19770 |
| GO:0006886 | ISO | PLAZA Integrative Orthology | intracellular protein transport | Os03g0262900 |
| GO:0048528 | ISO | PLAZA Integrative Orthology | post-embryonic root development | AT3G19770 |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT3G19770 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005085 | IEA | InterPro | guanyl-nucleotide exchange factor activity | |
| GO:0016624 | IEA | InterPro | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G19770 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | Os03g0262900 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os03g0262900 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G19770 |
| GO:0000325 | ISO | PLAZA Integrative Orthology | plant-type vacuole | Os03g0262900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037191 | VPS9 domain superfamily |
| IPR041545 | RABX5, catalytic core helical domain |
| IPR045046 | Vacuolar protein sorting-associated protein 9-like |
| IPR003123 | VPS9 domain |
| IPR019379 | Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR001017 | Dehydrogenase, E1 component |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Mapman id | Description |
|---|---|
| 18.11.1.5.3 | Protein modification.targeting peptide maturation.endomembrane system.gamma secretase complex.component PEN2 |
| 22.3.4.5.2 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.RAB5 nucleotide exchange factor (VPS9) |
| 4.2.7.2.1.1 | Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.E1 2-oxoisovalerate dehydrogenase subcomplex.subunit alpha |