Gene: Os03g0262900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os03g0262900
  • Transcript Identifier Os03t0262900-01
  • Gene Type Coding gene
  • Location chr03 : 8629970-8632125 : positive

Gene Family Information

  • ID HOM05D003132
  • #Genes/#Species 219/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os03t0262900-01
  • MSU-ID LOC_Os03g15650.3
  • MSU-ID LOC_Os03g15650.2
  • MSU-ID LOC_Os03g15650.1
  • symbol VPS9a
  • symbol OsVPS9A
  • symbol GPA2/VPS9a
  • symbol GLUP6/GEF
  • symbol GLUP6
  • symbol GPA2
  • name Vacuolar sorting protein9 domain-containing protein
  • name GLUTELIN PRECURSOR ACCUMULATION2
  • name glutelin precursor accumulation 2
  • uniprot Q10NQ3

Descriptions

  • Description Activator of Rab5 GTPase, Intracellular transport of the proglutelin
  • Description Hypothetical conserved gene.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT3G19770
GO:0048528
ISO
PLAZA Integrative Orthologypost-embryonic root development AT3G19770
GO:0045324
ISO
PLAZA Integrative Orthologylate endosome to vacuole transport AT3G19770
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G19770
GO:0000919
ISO
PLAZA Integrative Orthologycell plate assembly AT3G19770
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0006886
IMP
GOA Databaseintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IMP
IEA
GOA Databaseguanyl-nucleotide exchange factor activity
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity
GO:0005515
IPI
GOA Databaseprotein binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005096
IEA
GOA DatabaseGTPase activator activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IDA
IEA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G19770
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G19770
GO:0005802
IDA
GOA Databasetrans-Golgi network
GO:0000325
IDA
GOA Databaseplant-type vacuole
GO:0005794
IEA
GOA DatabaseGolgi apparatus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041545 RABX5, catalytic core helical domain
IPR045046 Vacuolar protein sorting-associated protein 9-like
IPR037191 VPS9 domain superfamily
Mapman id Description
22.3.4.5.2 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB5-RAB7-dependent pathway.RAB5 nucleotide exchange factor (VPS9)