Gene: ATR0665G144

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0665G144
  • Transcript Identifier ATR0665G144.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00002 : 10149967-10152801 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00002.581.v1.0
  • pacid 31562629

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016125
ISO
PLAZA Integrative Orthologysterol metabolic process AT4G14850
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT2G02980
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT4G18750
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT4G18750
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT3G22690
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT3G22690
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT4G18750
GO:0000963
ISO
PLAZA Integrative Orthologymitochondrial RNA processing AT4G30700
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G22690
GO:0016556
ISO
PLAZA Integrative OrthologymRNA modification AT1G11290
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT4G30700
GO:0019288
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway AT4G14850
GO:0050790
ISO
PLAZA Integrative Orthologyregulation of catalytic activity AT4G14850
GO:0019287
ISO
PLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathway AT4G14850
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G18750
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT3G22690
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G22690
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G14850
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT3G12770
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT3G22690
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT3G22690
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G49170
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT4G18750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G18485
GO:0034046
ISO
PLAZA Integrative Orthologypoly(G) binding AT4G14850
GO:0005515
IEA
InterProprotein binding
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT1G11290
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G26782
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G02980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
16.11.3.3.4.51 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP86)