Gene: AT4G14850
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G14850
- Transcript Identifier AT4G14850.1
- Gene Type Coding gene
- Location Chr4 : 8513947-8516275 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G14850.1
- symbol LOI1
- Alias MEF11,mitochondrial RNA editing factor 11
- full_name lovastatin insensitive 1
- uniprot Q0WSH6
Descriptions
- Description Pentatricopeptide repeat (PPR) superfamily protein
- Computational description lovastatin insensitive 1 (LOI1); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 35457 Blast hits to 13266 proteins in 222 species: Archae - 0; Bacteria - 4; Metazoa - 55; Fungi - 21; Plants - 34914; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009451 | IBA | Gene Ontology | RNA modification | 1 |
| GO:0050790 | IMP | Gene Ontology | regulation of catalytic activity | 2 |
| GO:0048364 | IMP | Gene Ontology | root development | 2 |
| GO:0019288 | IMP | Gene Ontology | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2 |
| GO:0019287 | IMP | Gene Ontology | isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2 |
| GO:0016125 | IMP | Gene Ontology | sterol metabolic process | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 3 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IBA | Gene Ontology | RNA binding | 1 |
| GO:0034046 | IDA | Gene Ontology | poly(G) binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IDA ISM, IBA | Gene Ontology | mitochondrion | 1 2 |
| GO:0043231 | IBA | Gene Ontology | intracellular membrane-bounded organelle | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.4.9 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF11) |