Gene: AT5G66420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G66420
  • Transcript Identifier AT5G66420.2
  • Gene Type Coding gene
  • Location Chr5 : 26521893-26524986 : negative

Gene Family Information

  • ID HOM05D004674
  • #Genes/#Species 156/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G66420.2
  • uniprot Q9FJZ7

Descriptions

  • Description TIM-barrel signal transduction protein
  • Computational description CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus Solyc02g062560.3
GO:0044830
ISO
PLAZA Integrative Orthologymodulation by host of viral RNA genome replication Solyc02g062560.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
Gene Ontologycatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Solyc02g062560.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005829
HDA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044122 UPF0261 domain
IPR009215 TIM-barrel domain, IGPS-like
IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily
IPR013785 Aldolase-type TIM barrel
Mapman id Description
35.1 not assigned.annotated