Gene: AT5G57280

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G57280
  • Transcript Identifier AT5G57280.1
  • Gene Type Coding gene
  • Location Chr5 : 23204533-23206485 : positive

Gene Family Information

  • ID HOM05D004410
  • #Genes/#Species 162/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G57280.1
  • symbol RID2
  • full_name root initiation defective 2
  • uniprot Q9LVD0

Descriptions

  • Description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
  • Computational description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (InterPro:IPR022238), Methyltransferase type 11 (InterPro:IPR013216); Has 984 Blast hits to 969 proteins in 433 species: Archae - 16; Bacteria - 445; Metazoa - 145; Fungi - 145; Plants - 54; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070476
IEA
GOA DatabaserRNA (guanine-N7)-methylation
GO:0070476
IBA
Gene OntologyrRNA (guanine-N7)-methylation1
GO:0070476
IEA
InterProrRNA (guanine-N7)-methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IMP
Gene OntologyrRNA processing2
GO:1990110
IMP
Gene Ontologycallus formation2
GO:0048527
IMP
Gene Ontologylateral root development3
GO:0048364
IMP
Gene Ontologyroot development3
GO:0010078
IMP
Gene Ontologymaintenance of root meristem identity3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016435
IEA
GOA DatabaserRNA (guanine) methyltransferase activity
GO:0016435
IBA
Gene OntologyrRNA (guanine) methyltransferase activity1
GO:0016435
IEA
InterProrRNA (guanine) methyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IDA
IBA
Gene Ontologynucleolus1 2
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus2
GO:0048471
IEA
GOA Databaseperinuclear region of cytoplasm
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005654
IEA
GOA Databasenucleoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022238 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23, C-terminal
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR013216 Methyltransferase type 11
IPR039769 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like
Mapman id Description
17.1.1.2.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)