Gene: AT5G57290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G57290
  • Transcript Identifier AT5G57290.1
  • Gene Type Coding gene
  • Location Chr5 : 23207049-23207835 : negative

Gene Family Information

  • ID HOM05D004854
  • #Genes/#Species 152/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G57290.1
  • uniprot Q9LVC9

Descriptions

  • Description 60S acidic ribosomal protein family
  • Computational description 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT4G25890.1); Has 1008 Blast hits to 988 proteins in 201 species: Archae - 2; Bacteria - 26; Metazoa - 438; Fungi - 137; Plants - 273; Viruses - 5; Other Eukaryotes - 127 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
Gene Ontologytranslational elongation
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia Zm00001eb226990

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0044877
ISO
PLAZA Integrative Orthologyprotein-containing complex binding Zm00001eb226990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome1
GO:0009536
HDA
Gene Ontologyplastid2
GO:0005829
IDA
GOA Databasecytosol
GO:0005634
IDA
GOA Databasenucleus
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit Zm00001eb226990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044252 60S acidic ribosomal protein P3-like
Mapman id Description
17.1.2.1.48 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPP3