Gene: AT5G53330
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G53330
- Transcript Identifier AT5G53330.1
- Gene Type Coding gene
- Location Chr5 : 21639236-21640716 : positive
Gene Family Information
- ID HOM05D004719
- #Genes/#Species 155/94
- Phylogenetic origin
- ID ORTHO05D005519
- #Genes/#Species 156/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G53330.1
- uniprot Q8LG11
Descriptions
- Description Ubiquitin-associated/translation elongation factor EF1B protein
- Computational description Ubiquitin-associated/translation elongation factor EF1B protein; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043162 | IEA | GOA Database | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | |
| GO:0043162 | IBA | Gene Ontology | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | 1 |
| GO:0043162 | IEA | InterPro | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | |
| GO:0006414 | IEA | GOA Database | translational elongation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043130 | IEA | GOA Database | ubiquitin binding | |
| GO:0043130 | IBA | Gene Ontology | ubiquitin binding | 1 |
| GO:0043130 | IEA | InterPro | ubiquitin binding | |
| GO:0003746 | IEA | GOA Database | translation elongation factor activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0009536 | HDA | Gene Ontology | plastid | 2 |
| GO:0000813 | IEA | GOA Database | ESCRT I complex | |
| GO:0000813 | IBA | Gene Ontology | ESCRT I complex | 1 |
| GO:0000813 | IEA | InterPro | ESCRT I complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |