Gene: AT5G47680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G47680
  • Transcript Identifier AT5G47680.1
  • Gene Type Coding gene
  • Location Chr5 : 19316329-19317467 : negative

Gene Family Information

  • ID HOM05D005493
  • #Genes/#Species 139/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G47680.1
  • symbol TRM10
  • Alias AtTRM
  • full_name tRNA modification 10
  • uniprot Q9FGI9

Descriptions

  • Description tRNA (guanine(9)-N1)-methyltransferase-like protein
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006400
IMP
Gene OntologytRNA modification1
GO:0080179
IMP
Gene Ontology1-methylguanosine metabolic process1
GO:0002939
IBA
Gene OntologytRNA N1-guanine methylation2
GO:0030488
IEA
GOA DatabasetRNA methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0090646
IBA
GOA Databasemitochondrial tRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0052905
IEA
Gene OntologytRNA (guanine(9)-N(1))-methyltransferase activity
GO:0000049
IBA
Gene OntologytRNA binding2
GO:0009019
IBA
Gene OntologytRNA (guanine-N1-)-methyltransferase activity2
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016009 tRNA methyltransferase TRMD/TRM10-type domain
IPR007356 tRNA (guanine-N1-)-methyltransferase, eukaryotic
IPR038459 tRNA methyltransferase TRM10-type domain superfamily
IPR016653 tRNA (guanine(9)-N(1))-methyltransferase TRM10/TRM10A
Mapman id Description
16.5.7.11 RNA processing.RNA modification.tRNA methylation.tRNA guanosine-methyltransferase (TRM10)