Gene: AT5G36670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G36670
  • Transcript Identifier AT5G36670.4
  • Gene Type Coding gene
  • Location Chr5 : 14401491-14406427 : positive

Gene Family Information

  • ID HOM05D000366
  • #Genes/#Species 1311/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G36670.4
  • uniprot F4K4G6

Descriptions

  • Description RING/FYVE/PHD zinc finger superfamily protein
  • Computational description RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: A.T hook-like (InterPro:IPR020478), AT hook, DNA-binding motif (InterPro:IPR017956), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT5G36740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IEA
Gene Ontologynegative regulation of transcription, DNA-templated
GO:0045892
IEA
InterPronegative regulation of transcription, DNA-templated
GO:0045944
IBA
Gene Ontologypositive regulation of transcription by RNA polymerase II1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IEA
Gene Ontologytranscription corepressor activity
GO:0003714
IEA
InterProtranscription corepressor activity
GO:0000977
IBA
Gene OntologyRNA polymerase II transcription regulatory region sequence-specific DNA binding1
GO:0003682
IBA
Gene Ontologychromatin binding1
GO:0042393
IBA
Gene Ontologyhistone binding1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019787 Zinc finger, PHD-finger
IPR032308 Jas TPL-binding domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR017956 AT hook, DNA-binding motif
IPR011011 Zinc finger, FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR042163 PHD finger protein 12
Mapman id Description
35.1 not assigned.annotated