Gene: AT5G13220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G13220
  • Transcript Identifier AT5G13220.2
  • Gene Type Coding gene
  • Location Chr5 : 4219001-4219996 : positive

Gene Family Information

  • ID HOM05D006285
  • #Genes/#Species 127/71
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G13220.2
  • symbol JAZ10
  • Alias JAS1,JASMONATE-ASSOCIATED 1,TIFY9,TIFY DOMAIN PROTEIN 9
  • uniprot Q93ZM9

Descriptions

  • Description jasmonate-zim-domain protein 10
  • Computational description jasmonate-zim-domain protein 10 (JAZ10); FUNCTIONS IN: protein binding; INVOLVED IN: response to jasmonic acid stimulus, regulation of systemic acquired resistance, response to wounding; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 12 (TAIR:AT5G20900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description jasmonate-zim-domain protein 10 (JAZ10); CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 1 (TAIR:AT1G19180.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000022
IMP
IBA
Gene Ontologyregulation of jasmonic acid mediated signaling pathway1 2
GO:0006952
IEA
GOA Databasedefense response
GO:0009611
IMP, IEP
IBA
Gene Ontologyresponse to wounding2 3
GO:0031347
IBA
Gene Ontologyregulation of defense response2
GO:0010112
IEP
Gene Ontologyregulation of systemic acquired resistance4
GO:0009753
IMP, IEP
Gene Ontologyresponse to jasmonic acid3 5
GO:0009751
IMP
Gene Ontologyresponse to salicylic acid3
GO:0009733
IMP
Gene Ontologyresponse to auxin3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0042803
IPI
Gene Ontologyprotein homodimerization activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040390 TIFY/JAZ family
IPR010399 Tify domain
IPR018467 CO/COL/TOC1, conserved site
Mapman id Description
15.5.43 RNA biosynthesis.transcriptional regulation.transcription factor (TIFY)